A structured family GH16 glycoside hydrolase database数据库介绍

数据库名称:A structured family GH16 glycoside hydrolase database

数据库简述:A structured family GH16 glycoside hydrolase database

所属国家/地区:Germany

数据库主要信息:A structured family GH16 glycoside hydrolase database has been constructed (http://www.ghdb.uni-stuttgart.de) and provides multiple sequence alignments with functionally annotated amino acid residues and phylogenetic trees. The database has been used for homology modeling of seven glycoside hydrolases from the GH16 family with various substrate specificities, based on structural coordinates for (1,3;1,4)-beta-D-glucan endohydrolases and a kappa-carrageenase. In combination with multiple sequence alignments, the models predict the three-dimensional (3D) dispositions of amino acid residues in the substrate-binding and catalytic sites of XTHs and (1,3/1,3;1,4)-beta-d-glucan endohydrolases; there is no structural information available in the databases for the latter group of enzymes.

建立年份:2004

联系信息:Contact information

University/Institution:
University of Stuttgart

Address:
Institute of Technical Biochemistry at the University of Stuttgart, D-70569 Stuttgart, Germany.

City:

Province/State:

Country/Region:
Germany

Contact name (PI/Team):
Jürgen Pleiss

Contact email (PI/Helpdesk):
Juergen.Pleiss@itb.uni-stuttgart.de

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