数据库名称：APASdb 2.0
数据库简述：Alternative Poly(A) Sites database 2.0
所属国家/地区：China
数据库主要信息：A web-accessible database, named APASdb, which can visualize the precise map and usage quantification of different APA isoforms for all genes. The datasets are deeply profiled by the sequencing alternative polyadenylation sites (SAPAS) method capable of high-throughput sequencing 3′-ends of polyadenylated transcripts. Thus, APASdb details all the heterogeneous cleavage sites downstream of poly(A) signals, and maintains near complete coverage for APA sites, much better than the previous databases using conventional methods. Furthermore, APASdb provides the quantification of a given APA variant among transcripts with different APA sites by computing their corresponding normalized-reads, making our database more useful. In addition, APASdb supports URL-based retrieval, browsing and display of exon-intron structure, poly(A) signals, poly(A) sites location and usage reads, and 3′-untranslated regions (3′-UTRs).
建立年份：2014
联系信息：Contact information
University/Institution:
Beijing University of Chinese Medine
Address:
No. 11 Dong San Huang Road, Chao-yang District, Beijing 100029, China
City:
Beijing
Province/State:
Country/Region:
China
Contact name (PI/Team):
Leiming YOU
Contact email (PI/Helpdesk):
youleiming@bucm.edu.cn
