CicArMiSatDB数据库介绍

数据库名称:CicArMiSatDB

数据库简述:Chickpea SSR Database

所属国家/地区:India

数据库主要信息:CicArMiSatDB is a web resource for exploring microsatellite (Simple Sequence Repeat) markers information for Chickpea. It provides valuable marker information to the chickpea breeding community. User may use this database to find marker information and explore them through the associated BLAST and Genome Browser implementations.

CicArMiSatDB could be mined by type of microsatellite (simple and compound), repeat pattern of motif (di- to hexa-nucleotide), presence of custom repeat motif and genomic locations. Integrated BLAST search enables one to search for existing SSR markers given a genomic sequence. Currently, the database contain 48,298 SSRs which are reported by Varshney et al 2013 .

建立年份:2014

联系信息:Contact information

University/Institution:
International Crops Research Institute for the Semi-Arid Tropics

Address:
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru 502324, India

City:

Province/State:

Country/Region:
India

Contact name (PI/Team):
Varshney RK

Contact email (PI/Helpdesk):
r.k.varshney@cgiar.org.

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