数据库名称:ClonorESTdb
数据库简述:
所属国家/地区:Korea, Republic of
数据库主要信息:the ClonorESTdb database represents a collection of Clonorchis sinensis ESTs that is intended as a resource for parasite functional genomics. A total of 55,736 successful EST sequences, which are cleaned and clustered into non-redundant 13,305 C. sinensis assembled EST sequences (6,497 clusters and 6,808 singletons), were obtained from three in-house prepared cDNA libraries of C. sinensis at different developmental stages. The assembled consensus sequences were annotated using the BLAST algorithm or/and hmm against NCBI NR, UniProt, KEGG and InterProScan. The ClonorESTdb database provides functional annotation, their expression profiles, tandem repeats and putative single nucleotide polymorphisms with utility tools such as local BLAST search and text retrieval
建立年份:2014
联系信息:Contact information
University/Institution:
Korea National Institute of Health
Address:
Division of Malaria and Parasitic Diseases, Centre for Immunology and Pathology, Korea National Institute of Health, Chungbuk 363-951, Republic of Korea
City:
Province/State:
Country/Region:
Korea, Republic of
Contact name (PI/Team):
Lee WJ
Contact email (PI/Helpdesk):
leewonja@gmail.com.