数据库名称：HSDB
数据库简述：
所属国家/地区：Korea, Republic of
数据库主要信息：HSDB is a database for providing gene centered SNPs and expression from NGS data of thoroughbred horse population. It helps to understand biology of horse by providing the expression and undetected SNP.
HSDB consists of two parts: SNPs and expression. HSDB provide expression result, twenty-four sets of transcriptome data was generated for muscle and blood from six horses both before and after exercise.
HSDB has successfully identified 3,418K of SNPs in horse genes include 5kb upstream and 5kb downstream region. The results display SNP types including, exon, intron, coding untranslated (UTR) regions, synonymous coding and non-synonymous coding. Identified variants were many by including rare variants of NGS as well as accurate.
The identified SNPs were confirmed by comparing with SNP chip , the concordance were 99.02%.
建立年份：2014
联系信息：Contact information
University/Institution:
Seoul National University
Address:
Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul 151-742, Korea.
City:
Province/State:
Country/Region:
Korea, Republic of
Contact name (PI/Team):
Seoae Cho
Contact email (PI/Helpdesk):
moc.scimonegknc@eaoes
