ISVdb数据库介绍

数据库名称:ISVdb

数据库简述:Inbred Strain Variant Database

所属国家/地区:United States

数据库主要信息:The Collaborative Cross (CC) is a panel of recently established multiparental recombinant inbred mouse strains. To provide standardized, easy-to-access CC sequence information, we have developed the Inbred Strain Variant Database (ISVdb). The ISVdb provides, for all the exonic variants from the Sanger Institute mouse sequencing dataset, direct sequence information for CC founders and, critically, the imputed sequence information for CC strains. Notably, the ISVdb also: (1) provides predicted variant consequence metadata; (2) allows rapid simulation of F1 populations; and (3) preserves imputation uncertainty, which will allow imputed data to be refined in the future as additional sequencing and genotyping data are collected.

建立年份:2017

联系信息:Contact information

University/Institution:
University of North Carolina at Chapel Hill

Address:
Department of Genetics, University of North Carolina, Chapel Hill, North Carolina 27599-7265

City:

Province/State:

Country/Region:
United States

Contact name (PI/Team):
William Valdar

Contact email (PI/Helpdesk):
william.valdar@unc.edu

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