数据库名称:NetREx
数据库简述:Network-based Rice Expression Analysis Server for abiotic stress conditions
所属国家/地区:India
数据库主要信息:With this objective, we have developed NetREx, a Network-based Rice Expression Analysis Server, that hosts ranked co-expression networks of Oryza sativa using publicly available messenger RNA sequencing data across uniform experimental conditions. It provides a range of interactable data viewers and modules for analysing user-queried genes across different stress conditions (drought, flood, cold and osmosis) and hormonal treatments (abscisic and jasmonic acid) and tissues (root and shoot). Subnetworks of user-defined genes can be queried in pre-constructed tissue-specific networks, allowing users to view the fold change, module memberships, gene annotations and analysis of their neighbourhood genes and associated pathways.
建立年份:2022
联系信息:Contact information
University/Institution:
International Institute of Information Technology-Hyderabad
Address:
Centre for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Gachibowli, Hyderabad 500032, India.
City:
Province/State:
Country/Region:
India
Contact name (PI/Team):
Nita Parekh
Contact email (PI/Helpdesk):
nita@iit.ac.in