数据库名称：Ori-Finder 3
数据库简述：a web server for genome-wide prediction of replication origins in Saccharomyces cerevisiae
所属国家/地区：China
数据库主要信息：Ori-Finder 3, for the computational prediction of replication origins in S. cerevisiae at the genome-wide level based solely on DNA sequences. The ARS exhibiting both an AT-rich stretch and ARS consensus sequence element can be predicted at the single-nucleotide level. For the identified ARSs in the S. cerevisiae reference genome, 83 and 60% of the top 100 and top 300 predictions matched the known ARS records, respectively. Based on Ori-Finder 3, we subsequently built a database of the predicted ARSs identified in more than a hundred S. cerevisiae genomes. Consequently, we developed a user-friendly web server including the ARS prediction pipeline and the predicted ARSs database.
建立年份：2008
联系信息：Contact information
University/Institution:
Tianjin University
Address:
Department of Physics, School of Science, Tianjin University, Tianjin 300072, China, Frontiers Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin 300072, China, and SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300072
City:
Tianjin
Province/State:
Tianjin
Country/Region:
China
Contact name (PI/Team):
Feng Gao
Contact email (PI/Helpdesk):
journals.permissions@oup.com
