数据库名称：SnpHub
数据库简述：SnpHub database
所属国家/地区：China
数据库主要信息：SnpHub is a Shiny/R-based server framework for retrieving, analysing, and visualizing large-scale genomic variation data that can be easily set up on any Linux server. After a pre-building process based on the provided VCF files and genome annotation files, the local server allows users to interactively access single-nucleotide polymorphisms and small insertions/deletions with annotation information by locus or gene and to define sample sets through a web page. Users can freely analyse and visualize genomic variations in heatmaps, phylogenetic trees, haplotype networks, or geographical maps. Sample-specific sequences can be accessed as replaced by detected sequence variations.
建立年份：2020
联系信息：Contact information
University/Institution:
China Agricultural University
Address:
Key Laboratory of Crop Heterosis and Utilization, State Key Laboratory for Agrobiotechnology, Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing 100193, China
City:
Beijing
Province/State:
Beijing
Country/Region:
China
Contact name (PI/Team):
Weilong Guo
Contact email (PI/Helpdesk):
nc.ude.uac@gnoliewoug
