tasiRNAdb数据库介绍

数据库名称:tasiRNAdb

数据库简述:database of ta-siRNA regulatory pathway

所属国家/地区:China

数据库主要信息:In plant, many “phase-initiator→TAS transcript↘ta-siRNA→target gene” ta-siRNA regulatory pathways have been identified as significant components of the gene networks involved in plant development, metabolism, responses to biotic and abiotic stresses, and DNA methylation at TAS locus. To obtain a comprehensive understanding on the nature of plant ta-siRNA regulatory pathways, we present a freely accessible resource, tasiRNAdb, to serve as a repository for the sequences of ta-siRNA regulatory pathway-related miRNAs, TASs, ta-siRNAs, and ta-siRNA targets, and for the cascading relations among them. Additionly, tasiRNAdb also offers a tool named TasExpAnalysis that was developed to map user’s small RNA and degradome libraries to collected TASs and do the sRNA phasing analysis and TAS cleavage analysis.

建立年份:2014

联系信息:Contact information

University/Institution:
Jinling Institute of Technology

Address:
College of Horticulture, Jinling Institute of Technology, Nanjing 210038, China

City:
Nanjing

Province/State:
Jiangsu

Country/Region:
China

Contact name (PI/Team):
Changqing Zhang

Contact email (PI/Helpdesk):
czhang13@ncsu.edu

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